Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| KIRP | rs3736519 | chr10:74968564 | A/C | 6.41E-12 | 212 | 16.73 | 11.3 | 5.6 | KM Plot |
| KIRP | rs3742646 | chr14:59931697 | G/A | 0.000115 | 212 | 16.43 | 15.07 | 6.63 | KM Plot |
| KIRP | rs3748405 | chr16:19870176 | T/C | 0.000132 | 210 | 15.08 | 16.43 | 13.17 | KM Plot |
| KIRP | rs375554796 | chr14:59914343 | C/G | 0.000115 | 212 | 16.43 | 17.03 | 6.63 | KM Plot |
| KIRP | rs3755832 | chr3:50305234 | G/A | 0.000126 | 211 | 15.07 | 25.23 | 7.13 | KM Plot |
| KIRP | rs3757138 | chr6:26376103 | A/G | 3.08E-7 | 214 | 16.45 | 13.6 | 9.77 | KM Plot |
| KIRP | rs375870932 | chr22:30128722 | CCTT/C | 0.000324 | 208 | 15.07 | 17.07 | 12.1 | KM Plot |
| KIRP | rs376386018 | chr5:79924201 | C/T | 0.000114 | 212 | 18.65 | 14.83 | 9.77 | KM Plot |
| KIRP | rs3763937 | chr11:34936252 | A/C | 4.61E-12 | 214 | 17.03 | 13.73 | 3.27 | KM Plot |
| KIRP | rs376411364 | chr14:59880280 | C/T | 0.000111 | 213 | 16.43 | 16.53 | 6.63 | KM Plot |
| KIRP | rs3766618 | chr1:209895437 | G/T | 8.57E-5 | 214 | 14.03 | 19.9 | 8.03 | KM Plot |
| KIRP | rs3766942 | chr1:89586305 | C/T | 6.95E-5 | 214 | 14.7 | 19.53 | 9.77 | KM Plot |
| KIRP | rs3771747 | chr2:74583478 | G/A | 1.24E-8 | 212 | 16.43 | 16.53 | 7.18 | KM Plot |
| KIRP | rs377189555 | chr6:26356038 | TTTTC/T | 3.08E-7 | 214 | 16.5 | 13.17 | 9.77 | KM Plot |
| KIRP | rs3772694 | chr3:100031309 | A/G | 4.66E-5 | 210 | 16.47 | 17.8 | 4.67 | KM Plot |